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HLA » Haplotype Frequency Search
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| Line | Haplotype | Population | Frequency (%) | Sample Size | Location |
|---|---|---|---|---|---|
| 1 | B*39:06-C*07:02-DRB1*14:06-DQB1*03:01 | Mexico Mexico City Mestizo pop 2 | 3.42 | 234 | 19_26_N_99_8_W |
| 2 | A*24:02-B*39:06-C*07:02-DRB1*14:06-DQB1*03:01 | Mexico Mexico City Mestizo pop 2 | 2.56 | 234 | 19_26_N_99_8_W |
| 3 | B*39:06-C*07:02-DRB1*14:06-DQB1*03:01 | Mexico Mexico City Mestizo population | 1.40 | 143 | 19_25_N_99_7_W |
| 4 | A*24:02-B*39:06-C*07:02-DRB1*14:06-DRB3*01:01-DQB1*03:01 | USA NMDP Mexican or Chicano | 1.01 | 261,235 | 38_45_N_76_6_W |
| 5 | A*31-B*39-DRB1*14:06-DQB1*03:01 | Mexico San Vicente Tancuayalab Teenek/Huastecos | 0.94 | 53 | 21_43_N_98_35_W |
| 6 | A*01-B*39-DRB1*14:06-DQB1*03:01 | Mexico Sinaloa Capomos Mayo Yoremes | 0.83 | 60 | 26_25_N_108_30_W |
| 7 | A*24:02-B*39:06-C*07:02-DRB1*14:06-DQA1*05:03-DQB1*03:01 | Mexico Tixcacaltuyub Maya | 0.75 | 67 | 20_29_N_88_54_W |
| 8 | A*68-B*39-DRB1*14:06-DQB1*03:01 | Bolivia Quechua | 0.72 | 69 | 16_30_S_68_9_W |
| 9 | A*24:02-B*39:06-C*07:02-DRB1*14:06-DQB1*03:01 | Mexico Mexico City Mestizo population | 0.70 | 143 | 19_25_N_99_7_W |
| 10 | A*31:01-B*39:06-C*07:02-DRB1*14:06-DQB1*03:01 | Mexico Mexico City Mestizo population | 0.70 | 143 | 19_25_N_99_7_W |
| 11 | A*02:01:01-B*39:01:01-C*07:01:01-DRB1*14:06:01-DQB1*03:01:01 | Mexico Hidalgo Mezquital Valley/ Otomi | 0.69 | 72 | 20_28_N_99_13_W |
| 12 | A*24:02:01-B*39:01:01-C*07:01:01-DRB1*14:06:01-DQB1*03:01:01 | Mexico Hidalgo Mezquital Valley/ Otomi | 0.69 | 72 | 20_28_N_99_13_W |
| 13 | A*24:02:01-B*39:06:01-C*07:01:01-DRB1*14:06:01-DQB1*03:01:01 | Mexico Hidalgo Mezquital Valley/ Otomi | 0.69 | 72 | 20_28_N_99_13_W |
| 14 | A*24:02-B*39:06-DRB1*14:06-DQB1*03:01 | Mexico Mexico City Tlalpan | 0.61 | 330 | 19_25_N_99_8_W |
| 15 | A*24:02-B*39:01-DRB1*14:06-DQB1*03:01 | Mexico Veracruz Xalapa | 0.60 | 84 | 19_32_N_96_55_W |
| 16 | A*24:02-B*39:06-C*07:02-DRB1*14:06-DQB1*03:01 | USA Hispanic pop 2 | 0.54 | 1,999 | 44_58_N_93_15_W |
| 17 | A*24:02-B*39:01-DRB1*14:06-DQB1*03:01 | Mexico Mexico City Tlalpan | 0.45 | 330 | 19_25_N_99_8_W |
| 18 | B*39:05-C*07:02-DRB1*14:06-DQB1*03:01 | Mexico Mexico City Mestizo pop 2 | 0.43 | 234 | 19_26_N_99_8_W |
| 19 | A*24:02-B*39:06-C*07:02-DRB1*14:06-DRB3*01:01-DQB1*03:01 | USA NMDP Hispanic South or Central American | 0.40 | 146,714 | 38_45_N_76_6_W |
| 20 | A*02-B*39-DRB1*14:06-DQB1*03:01 | Guatemala, Guatemala City Mixed Ancestry | 0.39 | 127 | 14_37_N_90_31_W |
| 21 | A*24-B*39-DRB1*14:06-DQB1*03:01 | Guatemala, Guatemala City Mixed Ancestry | 0.39 | 127 | 14_37_N_90_31_W |
| 22 | A*31:01-B*39:05-C*04:01-DRB1*14:06-DQA1*05:03-DQB1*03:01 | Brazil Puyanawa | 0.33 | 150 | 10_52_S_53_5_W |
| 23 | A*02:01-B*39:01-DRB1*14:06-DQB1*03:01 | Mexico Mexico City Tlalpan | 0.30 | 330 | 19_25_N_99_8_W |
| 24 | A*24:02-B*39:02-DRB1*14:06-DQB1*03:01 | Mexico Mexico City Tlalpan | 0.30 | 330 | 19_25_N_99_8_W |
| 25 | A*68:01-B*39:01-DRB1*14:06-DQB1*03:01 | Mexico Mexico City Tlalpan | 0.30 | 330 | 19_25_N_99_8_W |
| 26 | A*24:02-B*39:06-C*07:02-DRB1*14:06-DQA1*05:05-DQB1*03:01-DPA1*01:03-DPB1*04:02 | Mexico Chiapas Lacandon Mayans | 0.23 | 218 | 16_54_N_92_5_W |
| 27 | A*02:01-B*39:05-C*02:02-DRB1*14:06-DQA1*03:01-DQB1*03:01-DPB1*01:01 | Nicaragua Managua | 0.22 | 339 | 12_7_N_86_10_W |
| 28 | A*02:01:01-B*39:09:01-C*07:02:01-DRB1*14:06:01-DQB1*03:01:01-DPA1*01:03:01-DPB1*04:02:01 | Brazil Rio de Janeiro Caucasian | 0.19 | 521 | 22_54_S_43_12_W |
| 29 | A*31:01-B*39:01-DRB1*14:06-DQB1*03:01 | Mexico Mexico City Tlalpan | 0.15 | 330 | 19_25_N_99_8_W |
| 30 | A*02:01-B*39:06-C*07:02-DRB1*14:06-DQB1*03:01 | USA Hispanic pop 2 | 0.13 | 1,999 | 44_58_N_93_15_W |
| 31 | A*24:02-B*39:06-C*07:02-DRB1*14:06-DQB1*03:01 | USA NMDP American Indian South or Central America | 0.13 | 5,926 | 38_45_N_76_6_W |
| 32 | A*24-B*39-DRB1*14:06-DQB1*03:01 | Mexico San Vicente Tancuayalab Teenek/Huastecos | 0.10 | 53 | 21_43_N_98_35_W |
| 33 | A*31:01-B*39:06-C*07:02-DRB1*14:06-DQB1*03:01 | USA Hispanic pop 2 | 0.09 | 1,999 | 44_58_N_93_15_W |
| 34 | A*01-B*39-DRB1*14:06-DQA1*05:03-DQB1*03:01 | Brazil Paraná Caucasian | 0.08 | 641 | 23_25_S_51_55_W |
| 35 | A*02:06-B*39:01-C*07:02-DRB1*14:06-DQA1*05:03-DQB1*03:01-DPA1*01:03-DPB1*02:01 | Japan pop 17 | 0.07 | 3,078 | 37_36_N_138_2_E |
| 36 | A*24:02-B*39:06-C*07:02-DRB1*14:06-DRB3*01:01-DQB1*03:01 | USA NMDP Caribean Hispanic | 0.06 | 115,374 | 38_45_N_76_6_W |
| 37 | A*23:01-B*39:06-C*07:02-DRB1*14:06-DQB1*03:01 | USA Hispanic pop 2 | 0.06 | 1,999 | 44_58_N_93_15_W |
| 38 | A*03:01-B*39:06-C*07:02-DRB1*14:06-DQB1*03:01 | USA Hispanic pop 2 | 0.05 | 1,999 | 44_58_N_93_15_W |
| 39 | A*24:02-B*39:06-C*07:02-DRB1*14:06-DRB3*01:01-DQB1*03:01 | USA NMDP North American Amerindian | 0.04 | 35,791 | 38_45_N_76_6_W |
| 40 | A*24:02-B*39:01-C*07:02-DRB1*14:06-DQA1*05:03-DQB1*03:01-DPA1*02:02-DPB1*38:01 | Japan pop 17 | 0.03 | 3,078 | 37_36_N_138_2_E |
| 41 | A*68:01-B*39:24-C*07:01-DRB1*14:06-DQB1*03:01 | Germany DKMS - Turkey minority | 0.01 | 4,856 | 48_31_N_9_3_E |
| 42 | A*24:02-B*39:06-C*07:02-DRB1*14:06-DRB3*01:01-DQB1*03:01 | USA NMDP Middle Eastern or North Coast of Africa | 0.01 | 70,890 | 38_45_N_76_6_W |
| 43 | A*24:02-B*39:06-C*07:02-DRB1*14:06-DRB3*01:01-DQB1*03:01 | USA NMDP European Caucasian | 0.00 | 1,242,890 | 38_45_N_76_6_W |
| 44 | A*24:02-B*39:06-C*07:02-DRB1*14:06-DRB3*01:01-DQB1*03:01 | USA NMDP Filipino | 0.00 | 50,614 | 38_45_N_76_6_W |
| 45 | A*24:02-B*39:06-C*07:02-DRB1*14:06-DRB3*01:01-DQB1*03:01 | USA NMDP African American pop 2 | 0.00 | 416,581 | 38_45_N_76_6_W |
Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.
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